WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y111B2A.22c.1 Sequence Name  Y111B2A.22c.1
Length (nt)  2625   Chromosome Location  III: 12732496-12743929
Chromosome . Primary Identifier  III Chromosome Location . Start  12732496
Chromosome Location . End  12743929 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y111B2A.22c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007027 ssl-1 Y111B2A.22 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y111B2A.22c Y111B2A.22c 2625   III: 12732496-12732688

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y111B2A.22c.1 12732496 12743929 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon107957   193   III: 12732496-12732688 Caenorhabditis elegans
Exon107959   287   III: 12734036-12734322 Caenorhabditis elegans
Exon107962   511   III: 12735248-12735758 Caenorhabditis elegans
Exon107965   735   III: 12737671-12738405 Caenorhabditis elegans
Exon107968   248   III: 12739984-12740231 Caenorhabditis elegans
Exon107971   227   III: 12741823-12742049 Caenorhabditis elegans
Exon107973   424   III: 12743506-12743929 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y111B2A.22c.1 12732496 12743929 1

1 Sequence

Length
2625

1 Sequence Ontology Term

Identifier Name Description
transcript