WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y111B2A.22d.1 Sequence Name  Y111B2A.22d.1
Length (nt)  6750   Chromosome Location  III: 12715723-12743929
Chromosome . Primary Identifier  III Chromosome Location . Start  12715723
Chromosome Location . End  12743929 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y111B2A.22d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007027 ssl-1 Y111B2A.22 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y111B2A.22d Y111B2A.22d 6750   III: 12715723-12715899

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y111B2A.22d.1 12715723 12743929 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon107931   177   III: 12715723-12715899 Caenorhabditis elegans
Exon107934   786   III: 12718007-12718792 Caenorhabditis elegans
Exon107937   633   III: 12719442-12720074 Caenorhabditis elegans
Exon107940   831   III: 12721272-12722102 Caenorhabditis elegans
Exon107943   485   III: 12723287-12723771 Caenorhabditis elegans
Exon107946   955   III: 12725798-12726752 Caenorhabditis elegans
Exon107949   84   III: 12727230-12727313 Caenorhabditis elegans
Exon107951   144   III: 12727383-12727526 Caenorhabditis elegans
Exon107956   223   III: 12732466-12732688 Caenorhabditis elegans
Exon107960   287   III: 12734036-12734322 Caenorhabditis elegans
Exon107963   511   III: 12735248-12735758 Caenorhabditis elegans
Exon107966   735   III: 12737671-12738405 Caenorhabditis elegans
Exon107969   248   III: 12739984-12740231 Caenorhabditis elegans
Exon107972   227   III: 12741823-12742049 Caenorhabditis elegans
Exon107974   424   III: 12743506-12743929 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y111B2A.22d.1 12715723 12743929 1

1 Sequence

Length
6750

1 Sequence Ontology Term

Identifier Name Description
transcript