WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y111B2A.22b.1 Sequence Name  Y111B2A.22b.1
Length (nt)  5649   Chromosome Location  III: 12714588-12728642
Chromosome . Primary Identifier  III Chromosome Location . Start  12714588
Chromosome Location . End  12728642 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y111B2A.22b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007027 ssl-1 Y111B2A.22 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y111B2A.22b Y111B2A.22b 5649   III: 12714588-12714868

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y111B2A.22b.1 12714588 12728642 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon107926   281   III: 12714588-12714868 Caenorhabditis elegans
Exon107928   105   III: 12715510-12715614 Caenorhabditis elegans
Exon107930   229   III: 12715671-12715899 Caenorhabditis elegans
Exon107933   786   III: 12718007-12718792 Caenorhabditis elegans
Exon107936   633   III: 12719442-12720074 Caenorhabditis elegans
Exon107939   831   III: 12721272-12722102 Caenorhabditis elegans
Exon107942   485   III: 12723287-12723771 Caenorhabditis elegans
Exon107945   955   III: 12725798-12726752 Caenorhabditis elegans
Exon107948   84   III: 12727230-12727313 Caenorhabditis elegans
Exon107952   1260   III: 12727383-12728642 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y111B2A.22b.1 12714588 12728642 1

1 Sequence

Length
5649

1 Sequence Ontology Term

Identifier Name Description
transcript