WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y111B2A.22a.1 Sequence Name  Y111B2A.22a.1
Length (nt)  8002   Chromosome Location  III: 12714566-12744721
Chromosome . Primary Identifier  III Chromosome Location . Start  12714566
Chromosome Location . End  12744721 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y111B2A.22a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007027 ssl-1 Y111B2A.22 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y111B2A.22a Y111B2A.22a 7188   III: 12714588-12714868

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y111B2A.22a.1 12714566 12744721 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon107925   303   III: 12714566-12714868 Caenorhabditis elegans
Exon107927   105   III: 12715510-12715614 Caenorhabditis elegans
Exon107929   229   III: 12715671-12715899 Caenorhabditis elegans
Exon107932   786   III: 12718007-12718792 Caenorhabditis elegans
Exon107935   633   III: 12719442-12720074 Caenorhabditis elegans
Exon107938   831   III: 12721272-12722102 Caenorhabditis elegans
Exon107941   485   III: 12723287-12723771 Caenorhabditis elegans
Exon107944   955   III: 12725798-12726752 Caenorhabditis elegans
Exon107947   84   III: 12727230-12727313 Caenorhabditis elegans
Exon107950   144   III: 12727383-12727526 Caenorhabditis elegans
Exon107955   223   III: 12732466-12732688 Caenorhabditis elegans
Exon107958   287   III: 12734036-12734322 Caenorhabditis elegans
Exon107961   511   III: 12735248-12735758 Caenorhabditis elegans
Exon107964   735   III: 12737671-12738405 Caenorhabditis elegans
Exon107967   248   III: 12739984-12740231 Caenorhabditis elegans
Exon107970   227   III: 12741823-12742049 Caenorhabditis elegans
Exon107975   1216   III: 12743506-12744721 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y111B2A.22a.1 12714566 12744721 1

1 Sequence

Length
8002

1 Sequence Ontology Term

Identifier Name Description
transcript