WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y111B2A.19a.1 Sequence Name  Y111B2A.19a.1
Length (nt)  2478   Chromosome Location  III: 12688318-12698249
Chromosome . Primary Identifier  III Chromosome Location . Start  12688318
Chromosome Location . End  12698249 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y111B2A.19a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013739 spin-4 Y111B2A.19 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y111B2A.19a Y111B2A.19a 1539   III: 12688327-12688366

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y111B2A.19a.1 12688318 12698249 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon107896   49   III: 12688318-12688366 Caenorhabditis elegans
Exon107897   155   III: 12688422-12688576 Caenorhabditis elegans
Exon107898   141   III: 12688629-12688769 Caenorhabditis elegans
Exon107899   359   III: 12689834-12690192 Caenorhabditis elegans
Exon107901   144   III: 12692398-12692541 Caenorhabditis elegans
Exon107905   554   III: 12693783-12694336 Caenorhabditis elegans
Exon107909   197   III: 12695522-12695718 Caenorhabditis elegans
Exon107911   879   III: 12697371-12698249 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y111B2A.19a.1 12688318 12698249 1

1 Sequence

Length
2478

1 Sequence Ontology Term

Identifier Name Description
transcript