WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y111B2A.14n.1 Sequence Name  Y111B2A.14n.1
Length (nt)  1683   Chromosome Location  III: 12641850-12651231
Chromosome . Primary Identifier  III Chromosome Location . Start  12641850
Chromosome Location . End  12651231 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y111B2A.14n.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004161 pqn-80 Y111B2A.14 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y111B2A.14n Y111B2A.14n 1683   III: 12641850-12642314

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y111B2A.14n.1 12641850 12651231 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon107734   465   III: 12641850-12642314 Caenorhabditis elegans
Exon107758   126   III: 12644471-12644596 Caenorhabditis elegans
Exon107775   286   III: 12645025-12645310 Caenorhabditis elegans
Exon107792   273   III: 12645682-12645954 Caenorhabditis elegans
Exon107809   191   III: 12649659-12649849 Caenorhabditis elegans
Exon107827   143   III: 12650000-12650142 Caenorhabditis elegans
Exon107846   135   III: 12650194-12650328 Caenorhabditis elegans
Exon107861   64   III: 12651168-12651231 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y111B2A.14n.1 12641850 12651231 1

1 Sequence

Length
1683

1 Sequence Ontology Term

Identifier Name Description
transcript