WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y111B2A.14d.1 Sequence Name  Y111B2A.14d.1
Length (nt)  4260   Chromosome Location  III: 12626575-12651231
Chromosome . Primary Identifier  III Chromosome Location . Start  12626575
Chromosome Location . End  12651231 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y111B2A.14d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004161 pqn-80 Y111B2A.14 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y111B2A.14d Y111B2A.14d 4260   III: 12626575-12626718

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y111B2A.14d.1 12626575 12651231 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

21 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon107545   144   III: 12626575-12626718 Caenorhabditis elegans
Exon107552   81   III: 12626764-12626844 Caenorhabditis elegans
Exon107560   108   III: 12626911-12627018 Caenorhabditis elegans
Exon107568   606   III: 12628701-12629306 Caenorhabditis elegans
Exon107581   306   III: 12630373-12630678 Caenorhabditis elegans
Exon107598   281   III: 12631927-12632207 Caenorhabditis elegans
Exon107614   73   III: 12634857-12634929 Caenorhabditis elegans
Exon107631   206   III: 12635548-12635753 Caenorhabditis elegans
Exon107643   60   III: 12635801-12635860 Caenorhabditis elegans
Exon107663   320   III: 12637489-12637808 Caenorhabditis elegans
Exon107679   206   III: 12638881-12639086 Caenorhabditis elegans
Exon107695   39   III: 12639647-12639685 Caenorhabditis elegans
Exon107710   117   III: 12641050-12641166 Caenorhabditis elegans
Exon107724   495   III: 12641820-12642314 Caenorhabditis elegans
Exon107748   126   III: 12644471-12644596 Caenorhabditis elegans
Exon107765   286   III: 12645025-12645310 Caenorhabditis elegans
Exon107782   273   III: 12645682-12645954 Caenorhabditis elegans
Exon107799   191   III: 12649659-12649849 Caenorhabditis elegans
Exon107817   143   III: 12650000-12650142 Caenorhabditis elegans
Exon107836   135   III: 12650194-12650328 Caenorhabditis elegans
Exon107851   64   III: 12651168-12651231 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y111B2A.14d.1 12626575 12651231 1

1 Sequence

Length
4260

1 Sequence Ontology Term

Identifier Name Description
transcript