WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y111B2A.14t.1 Sequence Name  Y111B2A.14t.1
Length (nt)  2448   Chromosome Location  III: 12626575-12639703
Chromosome . Primary Identifier  III Chromosome Location . Start  12626575
Chromosome Location . End  12639703 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y111B2A.14t.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004161 pqn-80 Y111B2A.14 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y111B2A.14t Y111B2A.14t 2448   III: 12626575-12626718

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y111B2A.14t.1 12626575 12639703 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon107544   144   III: 12626575-12626718 Caenorhabditis elegans
Exon107554   81   III: 12626764-12626844 Caenorhabditis elegans
Exon107562   108   III: 12626911-12627018 Caenorhabditis elegans
Exon107570   606   III: 12628701-12629306 Caenorhabditis elegans
Exon107587   306   III: 12630373-12630678 Caenorhabditis elegans
Exon107608   281   III: 12631927-12632207 Caenorhabditis elegans
Exon107624   73   III: 12634857-12634929 Caenorhabditis elegans
Exon107641   206   III: 12635548-12635753 Caenorhabditis elegans
Exon107649   60   III: 12635801-12635860 Caenorhabditis elegans
Exon107673   320   III: 12637489-12637808 Caenorhabditis elegans
Exon107688   206   III: 12638881-12639086 Caenorhabditis elegans
Exon107704   57   III: 12639647-12639703 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y111B2A.14t.1 12626575 12639703 1

1 Sequence

Length
2448

1 Sequence Ontology Term

Identifier Name Description
transcript