WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y111B2A.14a.1 Sequence Name  Y111B2A.14a.1
Length (nt)  4788   Chromosome Location  III: 12626568-12651761
Chromosome . Primary Identifier  III Chromosome Location . Start  12626568
Chromosome Location . End  12651761 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y111B2A.14a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004161 pqn-80 Y111B2A.14 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y111B2A.14a Y111B2A.14a 4251   III: 12626575-12626718

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y111B2A.14a.1 12626568 12651761 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

21 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon107542   151   III: 12626568-12626718 Caenorhabditis elegans
Exon107547   81   III: 12626764-12626844 Caenorhabditis elegans
Exon107555   108   III: 12626911-12627018 Caenorhabditis elegans
Exon107563   606   III: 12628701-12629306 Caenorhabditis elegans
Exon107576   306   III: 12630373-12630678 Caenorhabditis elegans
Exon107593   281   III: 12631927-12632207 Caenorhabditis elegans
Exon107609   73   III: 12634857-12634929 Caenorhabditis elegans
Exon107626   206   III: 12635548-12635753 Caenorhabditis elegans
Exon107650   51   III: 12635810-12635860 Caenorhabditis elegans
Exon107658   320   III: 12637489-12637808 Caenorhabditis elegans
Exon107674   206   III: 12638881-12639086 Caenorhabditis elegans
Exon107690   39   III: 12639647-12639685 Caenorhabditis elegans
Exon107705   117   III: 12641050-12641166 Caenorhabditis elegans
Exon107719   495   III: 12641820-12642314 Caenorhabditis elegans
Exon107743   126   III: 12644471-12644596 Caenorhabditis elegans
Exon107760   286   III: 12645025-12645310 Caenorhabditis elegans
Exon107777   273   III: 12645682-12645954 Caenorhabditis elegans
Exon107794   191   III: 12649659-12649849 Caenorhabditis elegans
Exon107812   143   III: 12650000-12650142 Caenorhabditis elegans
Exon107831   135   III: 12650194-12650328 Caenorhabditis elegans
Exon107868   594   III: 12651168-12651761 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y111B2A.14a.1 12626568 12651761 1

1 Sequence

Length
4788

1 Sequence Ontology Term

Identifier Name Description
transcript