WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y111B2A.14s.1 Sequence Name  Y111B2A.14s.1
Length (nt)  3788   Chromosome Location  III: 12626568-12640476
Chromosome . Primary Identifier  III Chromosome Location . Start  12626568
Chromosome Location . End  12640476 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y111B2A.14s.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004161 pqn-80 Y111B2A.14 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y111B2A.14s Y111B2A.14s 2448   III: 12626575-12626718

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y111B2A.14s.1 12626568 12640476 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon107539   151   III: 12626568-12626718 Caenorhabditis elegans
Exon107553   81   III: 12626764-12626844 Caenorhabditis elegans
Exon107561   108   III: 12626911-12627018 Caenorhabditis elegans
Exon107569   606   III: 12628701-12629306 Caenorhabditis elegans
Exon107586   306   III: 12630373-12630678 Caenorhabditis elegans
Exon107607   281   III: 12631927-12632207 Caenorhabditis elegans
Exon107623   73   III: 12634857-12634929 Caenorhabditis elegans
Exon107640   206   III: 12635548-12635753 Caenorhabditis elegans
Exon107648   60   III: 12635801-12635860 Caenorhabditis elegans
Exon107672   320   III: 12637489-12637808 Caenorhabditis elegans
Exon107689   1596   III: 12638881-12640476 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y111B2A.14s.1 12626568 12640476 1

1 Sequence

Length
3788

1 Sequence Ontology Term

Identifier Name Description
transcript