WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y111B2A.11.1 Sequence Name  Y111B2A.11.1
Length (nt)  3341   Chromosome Location  III: 12599630-12608467
Chromosome . Primary Identifier  III Chromosome Location . Start  12599630
Chromosome Location . End  12608467 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y111B2A.11.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007030 epc-1 Y111B2A.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y111B2A.11 Y111B2A.11 2388   III: 12600474-12600540

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y111B2A.11.1 12599630 12608467 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon107506   911   III: 12599630-12600540 Caenorhabditis elegans
Exon107508   230   III: 12600890-12601119 Caenorhabditis elegans
Exon107510   389   III: 12602216-12602604 Caenorhabditis elegans
Exon107512   206   III: 12602673-12602878 Caenorhabditis elegans
Exon107514   860   III: 12604321-12605180 Caenorhabditis elegans
Exon107516   128   III: 12605811-12605938 Caenorhabditis elegans
Exon107518   180   III: 12605998-12606177 Caenorhabditis elegans
Exon107520   169   III: 12607055-12607223 Caenorhabditis elegans
Exon107522   268   III: 12608200-12608467 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y111B2A.11.1 12599630 12608467 -1

1 Sequence

Length
3341

1 Sequence Ontology Term

Identifier Name Description
transcript