WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y111B2A.8c.1 Sequence Name  Y111B2A.8c.1
Length (nt)  2781   Chromosome Location  III: 12538664-12575401
Chromosome . Primary Identifier  III Chromosome Location . Start  12538664
Chromosome Location . End  12575401 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y111B2A.8c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013732 aakg-1 Y111B2A.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y111B2A.8c Y111B2A.8c 2175   III: 12539004-12539285

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y111B2A.8c.1 12538664 12575401 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon107431   622   III: 12538664-12539285 Caenorhabditis elegans
Exon107438   111   III: 12540289-12540399 Caenorhabditis elegans
Exon107445   276   III: 12540677-12540952 Caenorhabditis elegans
Exon107452   256   III: 12542693-12542948 Caenorhabditis elegans
Exon107459   223   III: 12544619-12544841 Caenorhabditis elegans
Exon107464   73   III: 12547235-12547307 Caenorhabditis elegans
Exon107474   252   III: 12559999-12560250 Caenorhabditis elegans
Exon107477   143   III: 12561315-12561457 Caenorhabditis elegans
Exon107480   75   III: 12561805-12561879 Caenorhabditis elegans
Exon107484   222   III: 12572642-12572863 Caenorhabditis elegans
Exon107486   192   III: 12574633-12574824 Caenorhabditis elegans
Exon107488   74   III: 12574877-12574950 Caenorhabditis elegans
Exon107490   70   III: 12575091-12575160 Caenorhabditis elegans
Exon107493   192   III: 12575210-12575401 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y111B2A.8c.1 12538664 12575401 -1

1 Sequence

Length
2781

1 Sequence Ontology Term

Identifier Name Description
transcript