WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y111B2A.3.1 Sequence Name  Y111B2A.3.1
Length (nt)  2488   Chromosome Location  III: 12496538-12499347
Chromosome . Primary Identifier  III Chromosome Location . Start  12496538
Chromosome Location . End  12499347 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y111B2A.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013729 herd-1 Y111B2A.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y111B2A.3 Y111B2A.3 2157   III: 12496544-12496627

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y111B2A.3.1 12496538 12499347 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon107368   90   III: 12496538-12496627 Caenorhabditis elegans
Exon107369   113   III: 12496672-12496784 Caenorhabditis elegans
Exon107370   271   III: 12496834-12497104 Caenorhabditis elegans
Exon107371   1245   III: 12497152-12498396 Caenorhabditis elegans
Exon107372   187   III: 12498469-12498655 Caenorhabditis elegans
Exon107373   222   III: 12498713-12498934 Caenorhabditis elegans
Exon107374   360   III: 12498988-12499347 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y111B2A.3.1 12496538 12499347 1

1 Sequence

Length
2488

1 Sequence Ontology Term

Identifier Name Description
transcript