WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y49E10.20.1 Sequence Name  Y49E10.20.1
Length (nt)  1747   Chromosome Location  III: 12453588-12456850
Chromosome . Primary Identifier  III Chromosome Location . Start  12453588
Chromosome Location . End  12456850 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y49E10.20.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013039 scav-3 Y49E10.20 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y49E10.20 Y49E10.20 1605   III: 12453726-12453815

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y49E10.20.1 12453588 12456850 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon107293   228   III: 12453588-12453815 Caenorhabditis elegans
Exon107294   196   III: 12453869-12454064 Caenorhabditis elegans
Exon107295   244   III: 12454113-12454356 Caenorhabditis elegans
Exon107296   382   III: 12454436-12454817 Caenorhabditis elegans
Exon107297   129   III: 12454922-12455050 Caenorhabditis elegans
Exon107298   250   III: 12455347-12455596 Caenorhabditis elegans
Exon107299   188   III: 12456472-12456659 Caenorhabditis elegans
Exon107300   130   III: 12456721-12456850 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y49E10.20.1 12453588 12456850 -1

1 Sequence

Length
1747

1 Sequence Ontology Term

Identifier Name Description
transcript