WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y49E10.11a.1 Sequence Name  Y49E10.11a.1
Length (nt)  4185   Chromosome Location  III: 12398901-12421718
Chromosome . Primary Identifier  III Chromosome Location . Start  12398901
Chromosome Location . End  12421718 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y49E10.11a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013034 tat-1 Y49E10.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y49E10.11a Y49E10.11a 3420   III: 12399363-12399460

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y49E10.11a.1 12398901 12421718 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon107165   560   III: 12398901-12399460 Caenorhabditis elegans
Exon107170   125   III: 12400046-12400170 Caenorhabditis elegans
Exon107175   93   III: 12404785-12404877 Caenorhabditis elegans
Exon107179   257   III: 12405722-12405978 Caenorhabditis elegans
Exon107183   141   III: 12407302-12407442 Caenorhabditis elegans
Exon107187   134   III: 12407652-12407785 Caenorhabditis elegans
Exon107191   155   III: 12407928-12408082 Caenorhabditis elegans
Exon107195   530   III: 12409690-12410219 Caenorhabditis elegans
Exon107199   539   III: 12412124-12412662 Caenorhabditis elegans
Exon107203   301   III: 12413753-12414053 Caenorhabditis elegans
Exon107207   113   III: 12414860-12414972 Caenorhabditis elegans
Exon107211   240   III: 12415563-12415802 Caenorhabditis elegans
Exon107215   307   III: 12417470-12417776 Caenorhabditis elegans
Exon107219   186   III: 12418846-12419031 Caenorhabditis elegans
Exon107223   100   III: 12420074-12420173 Caenorhabditis elegans
Exon107227   58   III: 12420224-12420281 Caenorhabditis elegans
Exon107232   101   III: 12420622-12420722 Caenorhabditis elegans
Exon107236   245   III: 12421474-12421718 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y49E10.11a.1 12398901 12421718 -1

1 Sequence

Length
4185

1 Sequence Ontology Term

Identifier Name Description
transcript