WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y49E10.11c.1 Sequence Name  Y49E10.11c.1
Length (nt)  4705   Chromosome Location  III: 12398901-12421570
Chromosome . Primary Identifier  III Chromosome Location . Start  12398901
Chromosome Location . End  12421570 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y49E10.11c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013034 tat-1 Y49E10.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y49E10.11c Y49E10.11c 3579   III: 12401682-12402063

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y49E10.11c.1 12398901 12421570 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon107166   560   III: 12398901-12399460 Caenorhabditis elegans
Exon107172   125   III: 12400046-12400170 Caenorhabditis elegans
Exon107173   668   III: 12401396-12402063 Caenorhabditis elegans
Exon107178   93   III: 12404785-12404877 Caenorhabditis elegans
Exon107182   257   III: 12405722-12405978 Caenorhabditis elegans
Exon107186   141   III: 12407302-12407442 Caenorhabditis elegans
Exon107190   134   III: 12407652-12407785 Caenorhabditis elegans
Exon107194   155   III: 12407928-12408082 Caenorhabditis elegans
Exon107198   530   III: 12409690-12410219 Caenorhabditis elegans
Exon107202   539   III: 12412124-12412662 Caenorhabditis elegans
Exon107206   301   III: 12413753-12414053 Caenorhabditis elegans
Exon107210   113   III: 12414860-12414972 Caenorhabditis elegans
Exon107214   240   III: 12415563-12415802 Caenorhabditis elegans
Exon107218   307   III: 12417470-12417776 Caenorhabditis elegans
Exon107222   186   III: 12418846-12419031 Caenorhabditis elegans
Exon107226   100   III: 12420074-12420173 Caenorhabditis elegans
Exon107230   58   III: 12420224-12420281 Caenorhabditis elegans
Exon107233   101   III: 12420622-12420722 Caenorhabditis elegans
Exon107235   97   III: 12421474-12421570 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y49E10.11c.1 12398901 12421570 -1

1 Sequence

Length
4705

1 Sequence Ontology Term

Identifier Name Description
transcript