WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y79H2A.6a.1 Sequence Name  Y79H2A.6a.1
Length (nt)  1380   Chromosome Location  III: 12052424-12058458
Chromosome . Primary Identifier  III Chromosome Location . Start  12052424
Chromosome Location . End  12058458 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y79H2A.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000201 arx-3 Y79H2A.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y79H2A.6a Y79H2A.6a 1107   III: 12052694-12052714

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y79H2A.6a.1 12052424 12058458 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon106690   291   III: 12052424-12052714 Caenorhabditis elegans
Exon106694   91   III: 12053586-12053676 Caenorhabditis elegans
Exon106696   60   III: 12054549-12054608 Caenorhabditis elegans
Exon106698   134   III: 12054661-12054794 Caenorhabditis elegans
Exon106700   87   III: 12055076-12055162 Caenorhabditis elegans
Exon106702   304   III: 12056913-12057216 Caenorhabditis elegans
Exon106704   328   III: 12057997-12058324 Caenorhabditis elegans
Exon106706   85   III: 12058374-12058458 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y79H2A.6a.1 12052424 12058458 -1

1 Sequence

Length
1380

1 Sequence Ontology Term

Identifier Name Description
transcript