WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y79H2A.3c.1 Sequence Name  Y79H2A.3c.1
Length (nt)  3271   Chromosome Location  III: 12038861-12052303
Chromosome . Primary Identifier  III Chromosome Location . Start  12038861
Chromosome Location . End  12052303 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y79H2A.3c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013580 Y79H2A.3 Y79H2A.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y79H2A.3c Y79H2A.3c 3261   III: 12038861-12038980

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y79H2A.3c.1 12038861 12052303 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon106570   120   III: 12038861-12038980 Caenorhabditis elegans
Exon106591   237   III: 12042595-12042831 Caenorhabditis elegans
Exon106598   239   III: 12043776-12044014 Caenorhabditis elegans
Exon106605   472   III: 12045517-12045988 Caenorhabditis elegans
Exon106612   189   III: 12046093-12046281 Caenorhabditis elegans
Exon106618   113   III: 12047552-12047664 Caenorhabditis elegans
Exon106626   151   III: 12048434-12048584 Caenorhabditis elegans
Exon106632   120   III: 12048635-12048754 Caenorhabditis elegans
Exon106638   162   III: 12048802-12048963 Caenorhabditis elegans
Exon106644   80   III: 12049025-12049104 Caenorhabditis elegans
Exon106650   388   III: 12050059-12050446 Caenorhabditis elegans
Exon106656   230   III: 12050497-12050726 Caenorhabditis elegans
Exon106662   124   III: 12050799-12050922 Caenorhabditis elegans
Exon106668   261   III: 12050981-12051241 Caenorhabditis elegans
Exon106674   152   III: 12051808-12051959 Caenorhabditis elegans
Exon106680   106   III: 12052011-12052116 Caenorhabditis elegans
Exon106688   127   III: 12052177-12052303 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y79H2A.3c.1 12038861 12052303 -1

1 Sequence

Length
3271

1 Sequence Ontology Term

Identifier Name Description
transcript