WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y79H2A.3d.1 Sequence Name  Y79H2A.3d.1
Length (nt)  6036   Chromosome Location  III: 12031516-12052306
Chromosome . Primary Identifier  III Chromosome Location . Start  12031516
Chromosome Location . End  12052306 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y79H2A.3d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013580 Y79H2A.3 Y79H2A.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y79H2A.3d Y79H2A.3d 5835   III: 12031704-12031871

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y79H2A.3d.1 12031516 12052306 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

28 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon106530   356   III: 12031516-12031871 Caenorhabditis elegans
Exon106533   111   III: 12032479-12032589 Caenorhabditis elegans
Exon106537   324   III: 12032916-12033239 Caenorhabditis elegans
Exon106541   509   III: 12034165-12034673 Caenorhabditis elegans
Exon106545   94   III: 12034968-12035061 Caenorhabditis elegans
Exon106550   174   III: 12035941-12036114 Caenorhabditis elegans
Exon106555   744   III: 12037078-12037821 Caenorhabditis elegans
Exon106560   96   III: 12038089-12038184 Caenorhabditis elegans
Exon106565   120   III: 12038697-12038816 Caenorhabditis elegans
Exon106572   110   III: 12038871-12038980 Caenorhabditis elegans
Exon106577   83   III: 12039218-12039300 Caenorhabditis elegans
Exon106582   161   III: 12039397-12039557 Caenorhabditis elegans
Exon106592   237   III: 12042595-12042831 Caenorhabditis elegans
Exon106599   239   III: 12043776-12044014 Caenorhabditis elegans
Exon106606   472   III: 12045517-12045988 Caenorhabditis elegans
Exon106613   189   III: 12046093-12046281 Caenorhabditis elegans
Exon106619   113   III: 12047552-12047664 Caenorhabditis elegans
Exon106627   151   III: 12048434-12048584 Caenorhabditis elegans
Exon106633   120   III: 12048635-12048754 Caenorhabditis elegans
Exon106639   162   III: 12048802-12048963 Caenorhabditis elegans
Exon106645   80   III: 12049025-12049104 Caenorhabditis elegans
Exon106651   388   III: 12050059-12050446 Caenorhabditis elegans
Exon106657   230   III: 12050497-12050726 Caenorhabditis elegans
Exon106663   124   III: 12050799-12050922 Caenorhabditis elegans
Exon106669   261   III: 12050981-12051241 Caenorhabditis elegans
Exon106675   152   III: 12051808-12051959 Caenorhabditis elegans
Exon106681   106   III: 12052011-12052116 Caenorhabditis elegans
Exon106689   130   III: 12052177-12052306 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y79H2A.3d.1 12031516 12052306 -1

1 Sequence

Length
6036

1 Sequence Ontology Term

Identifier Name Description
transcript