WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y79H2A.3e.1 Sequence Name  Y79H2A.3e.1
Length (nt)  6008   Chromosome Location  III: 12031516-12052293
Chromosome . Primary Identifier  III Chromosome Location . Start  12031516
Chromosome Location . End  12052293 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y79H2A.3e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013580 Y79H2A.3 Y79H2A.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y79H2A.3e Y79H2A.3e 5820   III: 12031704-12031871

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y79H2A.3e.1 12031516 12052293 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

28 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon106528   356   III: 12031516-12031871 Caenorhabditis elegans
Exon106534   111   III: 12032479-12032589 Caenorhabditis elegans
Exon106538   324   III: 12032916-12033239 Caenorhabditis elegans
Exon106542   509   III: 12034165-12034673 Caenorhabditis elegans
Exon106547   79   III: 12034983-12035061 Caenorhabditis elegans
Exon106551   174   III: 12035941-12036114 Caenorhabditis elegans
Exon106556   744   III: 12037078-12037821 Caenorhabditis elegans
Exon106561   96   III: 12038089-12038184 Caenorhabditis elegans
Exon106566   120   III: 12038697-12038816 Caenorhabditis elegans
Exon106573   110   III: 12038871-12038980 Caenorhabditis elegans
Exon106578   83   III: 12039218-12039300 Caenorhabditis elegans
Exon106583   161   III: 12039397-12039557 Caenorhabditis elegans
Exon106593   237   III: 12042595-12042831 Caenorhabditis elegans
Exon106600   239   III: 12043776-12044014 Caenorhabditis elegans
Exon106607   472   III: 12045517-12045988 Caenorhabditis elegans
Exon106614   189   III: 12046093-12046281 Caenorhabditis elegans
Exon106620   113   III: 12047552-12047664 Caenorhabditis elegans
Exon106628   151   III: 12048434-12048584 Caenorhabditis elegans
Exon106634   120   III: 12048635-12048754 Caenorhabditis elegans
Exon106640   162   III: 12048802-12048963 Caenorhabditis elegans
Exon106646   80   III: 12049025-12049104 Caenorhabditis elegans
Exon106652   388   III: 12050059-12050446 Caenorhabditis elegans
Exon106658   230   III: 12050497-12050726 Caenorhabditis elegans
Exon106664   124   III: 12050799-12050922 Caenorhabditis elegans
Exon106670   261   III: 12050981-12051241 Caenorhabditis elegans
Exon106676   152   III: 12051808-12051959 Caenorhabditis elegans
Exon106682   106   III: 12052011-12052116 Caenorhabditis elegans
Exon106685   117   III: 12052177-12052293 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y79H2A.3e.1 12031516 12052293 -1

1 Sequence

Length
6008

1 Sequence Ontology Term

Identifier Name Description
transcript