WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y79H2A.1c.1 Sequence Name  Y79H2A.1c.1
Length (nt)  1548   Chromosome Location  III: 12021350-12025176
Chromosome . Primary Identifier  III Chromosome Location . Start  12021350
Chromosome Location . End  12025176 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y79H2A.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000273 brp-1 Y79H2A.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y79H2A.1c Y79H2A.1c 1548   III: 12021350-12021496

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y79H2A.1c.1 12021350 12025176 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon106503   147   III: 12021350-12021496 Caenorhabditis elegans
Exon106505   246   III: 12021554-12021799 Caenorhabditis elegans
Exon106507   447   III: 12022144-12022590 Caenorhabditis elegans
Exon106509   208   III: 12023529-12023736 Caenorhabditis elegans
Exon106511   191   III: 12023790-12023980 Caenorhabditis elegans
Exon106512   309   III: 12024868-12025176 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y79H2A.1c.1 12021350 12025176 1

1 Sequence

Length
1548

1 Sequence Ontology Term

Identifier Name Description
transcript