WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y79H2A.1a.1 Sequence Name  Y79H2A.1a.1
Length (nt)  1804   Chromosome Location  III: 12020552-12025321
Chromosome . Primary Identifier  III Chromosome Location . Start  12020552
Chromosome Location . End  12025321 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y79H2A.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000273 brp-1 Y79H2A.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y79H2A.1a Y79H2A.1a 1659   III: 12020552-12020629

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y79H2A.1a.1 12020552 12025321 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon106501   78   III: 12020552-12020629 Caenorhabditis elegans
Exon106502   180   III: 12021317-12021496 Caenorhabditis elegans
Exon106504   246   III: 12021554-12021799 Caenorhabditis elegans
Exon106506   447   III: 12022144-12022590 Caenorhabditis elegans
Exon106508   208   III: 12023529-12023736 Caenorhabditis elegans
Exon106510   191   III: 12023790-12023980 Caenorhabditis elegans
Exon106513   454   III: 12024868-12025321 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y79H2A.1a.1 12020552 12025321 1

1 Sequence

Length
1804

1 Sequence Ontology Term

Identifier Name Description
transcript