WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y56A3A.27.1 Sequence Name  Y56A3A.27.1
Length (nt)  2392   Chromosome Location  III: 11949918-11960180
Chromosome . Primary Identifier  III Chromosome Location . Start  11949918
Chromosome Location . End  11960180 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y56A3A.27.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006596 top-3A Y56A3A.27 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y56A3A.27 Y56A3A.27 2280   III: 11950018-11950269

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y56A3A.27.1 11949918 11960180 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon106417   352   III: 11949918-11950269 Caenorhabditis elegans
Exon106418   548   III: 11951157-11951704 Caenorhabditis elegans
Exon106419   293   III: 11953301-11953593 Caenorhabditis elegans
Exon106420   86   III: 11954504-11954589 Caenorhabditis elegans
Exon106421   485   III: 11955610-11956094 Caenorhabditis elegans
Exon106422   182   III: 11957172-11957353 Caenorhabditis elegans
Exon106423   129   III: 11957432-11957560 Caenorhabditis elegans
Exon106424   161   III: 11958550-11958710 Caenorhabditis elegans
Exon106425   156   III: 11960025-11960180 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y56A3A.27.1 11949918 11960180 -1

1 Sequence

Length
2392

1 Sequence Ontology Term

Identifier Name Description
transcript