WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y47D3B.11.1 Sequence Name  Y47D3B.11.1
Length (nt)  1888   Chromosome Location  III: 11456877-11462895
Chromosome . Primary Identifier  III Chromosome Location . Start  11456877
Chromosome Location . End  11462895 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y47D3B.11.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00023404 plr-1 Y47D3B.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y47D3B.11 Y47D3B.11 1464   III: 11456927-11457080

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y47D3B.11.1 11456877 11462895 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon105711   204   III: 11456877-11457080 Caenorhabditis elegans
Exon105712   89   III: 11457732-11457820 Caenorhabditis elegans
Exon105715   213   III: 11459787-11459999 Caenorhabditis elegans
Exon105716   674   III: 11460791-11461464 Caenorhabditis elegans
Exon105717   252   III: 11461917-11462168 Caenorhabditis elegans
Exon105718   456   III: 11462440-11462895 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y47D3B.11.1 11456877 11462895 1

1 Sequence

Length
1888

1 Sequence Ontology Term

Identifier Name Description
transcript