WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y47D3B.7.1 Sequence Name  Y47D3B.7.1
Length (nt)  3394   Chromosome Location  III: 11428367-11442566
Chromosome . Primary Identifier  III Chromosome Location . Start  11428367
Chromosome Location . End  11442566 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y47D3B.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004735 sbp-1 Y47D3B.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y47D3B.7 Y47D3B.7 3342   III: 11428418-11428609

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y47D3B.7.1 11428367 11442566 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon105697   243   III: 11428367-11428609 Caenorhabditis elegans
Exon105698   361   III: 11428665-11429025 Caenorhabditis elegans
Exon105699   154   III: 11436957-11437110 Caenorhabditis elegans
Exon105700   228   III: 11437157-11437384 Caenorhabditis elegans
Exon105701   397   III: 11437444-11437840 Caenorhabditis elegans
Exon105702   529   III: 11438150-11438678 Caenorhabditis elegans
Exon105703   194   III: 11438724-11438917 Caenorhabditis elegans
Exon105704   236   III: 11439441-11439676 Caenorhabditis elegans
Exon105705   420   III: 11440021-11440440 Caenorhabditis elegans
Exon105706   109   III: 11440494-11440602 Caenorhabditis elegans
Exon105707   310   III: 11441374-11441683 Caenorhabditis elegans
Exon105708   133   III: 11441942-11442074 Caenorhabditis elegans
Exon105709   80   III: 11442487-11442566 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y47D3B.7.1 11428367 11442566 -1

1 Sequence

Length
3394

1 Sequence Ontology Term

Identifier Name Description
transcript