WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y47D3B.5a.1 Sequence Name  Y47D3B.5a.1
Length (nt)  3785   Chromosome Location  III: 11410748-11424659
Chromosome . Primary Identifier  III Chromosome Location . Start  11410748
Chromosome Location . End  11424659 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y47D3B.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006683 twk-31 Y47D3B.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y47D3B.5a Y47D3B.5a 3267   III: 11410748-11410851

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y47D3B.5a.1 11410748 11424659 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

23 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon105647   104   III: 11410748-11410851 Caenorhabditis elegans
Exon105648   181   III: 11414324-11414504 Caenorhabditis elegans
Exon105651   111   III: 11415365-11415475 Caenorhabditis elegans
Exon105653   128   III: 11415532-11415659 Caenorhabditis elegans
Exon105655   93   III: 11415819-11415911 Caenorhabditis elegans
Exon105657   179   III: 11416640-11416818 Caenorhabditis elegans
Exon105659   139   III: 11416869-11417007 Caenorhabditis elegans
Exon105661   221   III: 11417898-11418118 Caenorhabditis elegans
Exon105663   143   III: 11418191-11418333 Caenorhabditis elegans
Exon105665   225   III: 11418385-11418609 Caenorhabditis elegans
Exon105667   68   III: 11419027-11419094 Caenorhabditis elegans
Exon105669   178   III: 11419143-11419320 Caenorhabditis elegans
Exon105671   129   III: 11419373-11419501 Caenorhabditis elegans
Exon105673   153   III: 11419983-11420135 Caenorhabditis elegans
Exon105675   69   III: 11420186-11420254 Caenorhabditis elegans
Exon105677   185   III: 11420309-11420493 Caenorhabditis elegans
Exon105679   100   III: 11420537-11420636 Caenorhabditis elegans
Exon105681   99   III: 11421412-11421510 Caenorhabditis elegans
Exon105683   539   III: 11421562-11422100 Caenorhabditis elegans
Exon105686   154   III: 11422928-11423081 Caenorhabditis elegans
Exon105688   25   III: 11423188-11423212 Caenorhabditis elegans
Exon105689   102   III: 11423441-11423542 Caenorhabditis elegans
Exon105691   460   III: 11424200-11424659 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y47D3B.5a.1 11410748 11424659 1

1 Sequence

Length
3785

1 Sequence Ontology Term

Identifier Name Description
transcript