WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y47D3B.1.1 Sequence Name  Y47D3B.1.1
Length (nt)  1729   Chromosome Location  III: 11382222-11388669
Chromosome . Primary Identifier  III Chromosome Location . Start  11382222
Chromosome Location . End  11388669 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y47D3B.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012939 subs-4 Y47D3B.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y47D3B.1 Y47D3B.1 1572   III: 11382281-11382319

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y47D3B.1.1 11382222 11388669 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon105611   98   III: 11382222-11382319 Caenorhabditis elegans
Exon105612   118   III: 11382954-11383071 Caenorhabditis elegans
Exon105613   150   III: 11383122-11383271 Caenorhabditis elegans
Exon105614   118   III: 11383323-11383440 Caenorhabditis elegans
Exon105615   60   III: 11383489-11383548 Caenorhabditis elegans
Exon105616   394   III: 11384719-11385112 Caenorhabditis elegans
Exon105617   187   III: 11385967-11386153 Caenorhabditis elegans
Exon105618   169   III: 11387345-11387513 Caenorhabditis elegans
Exon105619   130   III: 11387566-11387695 Caenorhabditis elegans
Exon105620   127   III: 11388214-11388340 Caenorhabditis elegans
Exon105622   178   III: 11388492-11388669 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y47D3B.1.1 11382222 11388669 1

1 Sequence

Length
1729

1 Sequence Ontology Term

Identifier Name Description
transcript