Genomics
1 Transcripts
| WormMine ID | Sequence Name | Length (nt) | Chromosome Location |
|---|---|---|---|
| Transcript:T28D6.12 | T28D6.12 |
165
 |
III: 11355887-11356051 |
Other
1 Chromosome Location
|
Feature . Primary Identifier |
Start | End | Strand |
|---|---|---|---|
| WBGene00196577 | 11355887 | 11356051 | -1 |
1 Downstream Intergenic Region
| WormBase ID | Name | Sequence Name | Length (nt) | Chromosome Location | Organism |
|---|---|---|---|---|---|
| intergenic_region_chrIII_11353701..11355886 | 2186 | III: 11353701-11355886 | Caenorhabditis elegans |
3 Expression Clusters
| Regulated By Treatment | Description | Algorithm | Primary Identifier |
|---|---|---|---|
| Bacteria Diet: L. plantarum with pdxH mutant vs. L. plantarum | Transcripts that showed significantly decreased expression in N2 animals fed with L. plantarum with pdxH mutant, comparing to in N2 animals fed with L. plantarum. | GFold3, logFC < -1 or > 1. | WBPaper00066703:L.plantarum-pdxH_downregulated |
| ncRNAs with significantly decreased expression in cep-1(gk138) than in N2 after UV irradiation, according to RNAseq. | ncRNAs with more than 2 fold difference in expression are considered differentially expressed | WBPaper00045380:cep-1(gk138)_downregulated_UV | |
| ncRNAs with significantly increased expression in cep-1(gk138) than in N2 under normal conditions, according to RNAseq. | ncRNAs with more than 2 fold difference in expression are considered differentially expressed | WBPaper00045380:cep-1(gk138)_upregulated_normal |
1 Upstream Intergenic Region
| WormBase ID | Name | Sequence Name | Length (nt) | Chromosome Location | Organism |
|---|---|---|---|---|---|
| intergenic_region_chrIII_11356052..11360455 | 4404 | III: 11356052-11360455 | Caenorhabditis elegans |
