WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y47D3A.26c.1 Sequence Name  Y47D3A.26c.1
Length (nt)  990   Chromosome Location  III: 11300791-11305900
Chromosome . Primary Identifier  III Chromosome Location . Start  11300791
Chromosome Location . End  11305900 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y47D3A.26c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004873 smc-3 Y47D3A.26 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y47D3A.26c Y47D3A.26c 990   III: 11300791-11301000

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y47D3A.26c.1 11300791 11305900 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon105442   210   III: 11300791-11301000 Caenorhabditis elegans
Exon105444   210   III: 11302716-11302925 Caenorhabditis elegans
Exon105446   115   III: 11303375-11303489 Caenorhabditis elegans
Exon105448   197   III: 11304649-11304845 Caenorhabditis elegans
Exon105450   79   III: 11305235-11305313 Caenorhabditis elegans
Exon105451   179   III: 11305722-11305900 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y47D3A.26c.1 11300791 11305900 1

1 Sequence

Length
990

1 Sequence Ontology Term

Identifier Name Description
transcript