WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y47D3A.26a.1 Sequence Name  Y47D3A.26a.1
Length (nt)  4003   Chromosome Location  III: 11290904-11306247
Chromosome . Primary Identifier  III Chromosome Location . Start  11290904
Chromosome Location . End  11306247 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y47D3A.26a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004873 smc-3 Y47D3A.26 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y47D3A.26a Y47D3A.26a 3618   III: 11290942-11290956

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y47D3A.26a.1 11290904 11306247 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon105428   53   III: 11290904-11290956 Caenorhabditis elegans
Exon105429   115   III: 11291000-11291114 Caenorhabditis elegans
Exon105430   233   III: 11291164-11291396 Caenorhabditis elegans
Exon105431   187   III: 11291449-11291635 Caenorhabditis elegans
Exon105432   406   III: 11292671-11293076 Caenorhabditis elegans
Exon105433   103   III: 11294239-11294341 Caenorhabditis elegans
Exon105434   249   III: 11295481-11295729 Caenorhabditis elegans
Exon105435   104   III: 11296411-11296514 Caenorhabditis elegans
Exon105436   100   III: 11296573-11296672 Caenorhabditis elegans
Exon105437   200   III: 11297444-11297643 Caenorhabditis elegans
Exon105438   115   III: 11297929-11298043 Caenorhabditis elegans
Exon105439   588   III: 11298760-11299347 Caenorhabditis elegans
Exon105440   132   III: 11300133-11300264 Caenorhabditis elegans
Exon105441   291   III: 11300710-11301000 Caenorhabditis elegans
Exon105443   210   III: 11302716-11302925 Caenorhabditis elegans
Exon105445   115   III: 11303375-11303489 Caenorhabditis elegans
Exon105447   197   III: 11304649-11304845 Caenorhabditis elegans
Exon105449   79   III: 11305235-11305313 Caenorhabditis elegans
Exon105452   526   III: 11305722-11306247 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y47D3A.26a.1 11290904 11306247 1

1 Sequence

Length
4003

1 Sequence Ontology Term

Identifier Name Description
transcript