WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y47D3A.17c.1 Sequence Name  Y47D3A.17c.1
Length (nt)  2529   Chromosome Location  III: 11257505-11267691
Chromosome . Primary Identifier  III Chromosome Location . Start  11257505
Chromosome Location . End  11267691 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y47D3A.17c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012930 obr-1 Y47D3A.17 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y47D3A.17c Y47D3A.17c 2529   III: 11257505-11257647

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y47D3A.17c.1 11257505 11267691 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon105285   143   III: 11257505-11257647 Caenorhabditis elegans
Exon105292   98   III: 11258079-11258176 Caenorhabditis elegans
Exon105300   123   III: 11258228-11258350 Caenorhabditis elegans
Exon105308   173   III: 11258396-11258568 Caenorhabditis elegans
Exon105316   318   III: 11258913-11259230 Caenorhabditis elegans
Exon105324   156   III: 11259881-11260036 Caenorhabditis elegans
Exon105332   111   III: 11260133-11260243 Caenorhabditis elegans
Exon105341   229   III: 11260840-11261068 Caenorhabditis elegans
Exon105348   137   III: 11263368-11263504 Caenorhabditis elegans
Exon105355   117   III: 11264366-11264482 Caenorhabditis elegans
Exon105362   89   III: 11265291-11265379 Caenorhabditis elegans
Exon105369   120   III: 11265434-11265553 Caenorhabditis elegans
Exon105375   133   III: 11266214-11266346 Caenorhabditis elegans
Exon105381   73   III: 11266944-11267016 Caenorhabditis elegans
Exon105384   509   III: 11267183-11267691 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y47D3A.17c.1 11257505 11267691 -1

1 Sequence

Length
2529

1 Sequence Ontology Term

Identifier Name Description
transcript