WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y47D3A.17b.4 Sequence Name  Y47D3A.17b.4
Length (nt)  1949   Chromosome Location  III: 11257505-11266348
Chromosome . Primary Identifier  III Chromosome Location . Start  11257505
Chromosome Location . End  11266348 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y47D3A.17b.4

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012930 obr-1 Y47D3A.17 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y47D3A.17b Y47D3A.17b 1884   III: 11257505-11257647

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y47D3A.17b.4 11257505 11266348 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon105284   143   III: 11257505-11257647 Caenorhabditis elegans
Exon105291   98   III: 11258079-11258176 Caenorhabditis elegans
Exon105299   123   III: 11258228-11258350 Caenorhabditis elegans
Exon105307   173   III: 11258396-11258568 Caenorhabditis elegans
Exon105315   318   III: 11258913-11259230 Caenorhabditis elegans
Exon105323   156   III: 11259881-11260036 Caenorhabditis elegans
Exon105331   111   III: 11260133-11260243 Caenorhabditis elegans
Exon105340   229   III: 11260840-11261068 Caenorhabditis elegans
Exon105347   137   III: 11263368-11263504 Caenorhabditis elegans
Exon105354   117   III: 11264366-11264482 Caenorhabditis elegans
Exon105361   89   III: 11265291-11265379 Caenorhabditis elegans
Exon105368   120   III: 11265434-11265553 Caenorhabditis elegans
Exon105377   135   III: 11266214-11266348 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y47D3A.17b.4 11257505 11266348 -1

1 Sequence

Length
1949

1 Sequence Ontology Term

Identifier Name Description
transcript