WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y47D3A.17d.1 Sequence Name  Y47D3A.17d.1
Length (nt)  1552   Chromosome Location  III: 11257303-11261067
Chromosome . Primary Identifier  III Chromosome Location . Start  11257303
Chromosome Location . End  11261067 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y47D3A.17d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012930 obr-1 Y47D3A.17 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y47D3A.17d Y47D3A.17d 1350   III: 11257505-11257647

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y47D3A.17d.1 11257303 11261067 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon105280   345   III: 11257303-11257647 Caenorhabditis elegans
Exon105293   98   III: 11258079-11258176 Caenorhabditis elegans
Exon105301   123   III: 11258228-11258350 Caenorhabditis elegans
Exon105309   173   III: 11258396-11258568 Caenorhabditis elegans
Exon105317   318   III: 11258913-11259230 Caenorhabditis elegans
Exon105325   156   III: 11259881-11260036 Caenorhabditis elegans
Exon105333   111   III: 11260133-11260243 Caenorhabditis elegans
Exon105335   228   III: 11260840-11261067 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y47D3A.17d.1 11257303 11261067 -1

1 Sequence

Length
1552

1 Sequence Ontology Term

Identifier Name Description
transcript