WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y47D3A.6b.1 Sequence Name  Y47D3A.6b.1
Length (nt)  1289   Chromosome Location  III: 11182016-11195201
Chromosome . Primary Identifier  III Chromosome Location . Start  11182016
Chromosome Location . End  11195201 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y47D3A.6b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006604 tra-1 Y47D3A.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y47D3A.6b Y47D3A.6b 867   III: 11182300-11182497

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y47D3A.6b.1 11182016 11195201 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon105190   482   III: 11182016-11182497 Caenorhabditis elegans
Exon105194   109   III: 11182978-11183086 Caenorhabditis elegans
Exon105197   44   III: 11183148-11183191 Caenorhabditis elegans
Exon105200   221   III: 11183714-11183934 Caenorhabditis elegans
Exon105203   117   III: 11191815-11191931 Caenorhabditis elegans
Exon105207   61   III: 11193042-11193102 Caenorhabditis elegans
Exon105209   96   III: 11194865-11194960 Caenorhabditis elegans
Exon105211   159   III: 11195043-11195201 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y47D3A.6b.1 11182016 11195201 -1

1 Sequence

Length
1289

1 Sequence Ontology Term

Identifier Name Description
transcript