WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y48A6C.5b.1 Sequence Name  Y48A6C.5b.1
Length (nt)  2096   Chromosome Location  III: 11131775-11136692
Chromosome . Primary Identifier  III Chromosome Location . Start  11131775
Chromosome Location . End  11136692 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y48A6C.5b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004010 pha-1 Y48A6C.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y48A6C.5b Y48A6C.5b 1362   III: 11131799-11131846

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y48A6C.5b.1 11131775 11136692 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon105119   72   III: 11131775-11131846 Caenorhabditis elegans
Exon105122   99   III: 11132459-11132557 Caenorhabditis elegans
Exon105124   179   III: 11132672-11132850 Caenorhabditis elegans
Exon105126   122   III: 11132903-11133024 Caenorhabditis elegans
Exon105128   169   III: 11133094-11133262 Caenorhabditis elegans
Exon105130   1455   III: 11135238-11136692 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y48A6C.5b.1 11131775 11136692 1

1 Sequence

Length
2096

1 Sequence Ontology Term

Identifier Name Description
transcript