WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y48A6B.11a.1 Sequence Name  Y48A6B.11a.1
Length (nt)  3027   Chromosome Location  III: 11063479-11068758
Chromosome . Primary Identifier  III Chromosome Location . Start  11063479
Chromosome Location . End  11068758 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y48A6B.11a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012972 rsa-2 Y48A6B.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y48A6B.11a Y48A6B.11a 2844   III: 11063556-11063674

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y48A6B.11a.1 11063479 11068758 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon104968   196   III: 11063479-11063674 Caenorhabditis elegans
Exon104969   50   III: 11063729-11063778 Caenorhabditis elegans
Exon104971   249   III: 11063873-11064121 Caenorhabditis elegans
Exon104973   380   III: 11064173-11064552 Caenorhabditis elegans
Exon104976   194   III: 11065098-11065291 Caenorhabditis elegans
Exon104977   229   III: 11065376-11065604 Caenorhabditis elegans
Exon104979   1059   III: 11065769-11066827 Caenorhabditis elegans
Exon104985   468   III: 11067154-11067621 Caenorhabditis elegans
Exon104987   202   III: 11068557-11068758 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y48A6B.11a.1 11063479 11068758 1

1 Sequence

Length
3027

1 Sequence Ontology Term

Identifier Name Description
transcript