WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y48A6B.13a.1 Sequence Name  Y48A6B.13a.1
Length (nt)  3029   Chromosome Location  III: 11048843-11063025
Chromosome . Primary Identifier  III Chromosome Location . Start  11048843
Chromosome Location . End  11063025 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y48A6B.13a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012973 spat-2 Y48A6B.13 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y48A6B.13a Y48A6B.13a 1806   III: 11048882-11049124

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y48A6B.13a.1 11048843 11063025 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon104774   282   III: 11048843-11049124 Caenorhabditis elegans
Exon104778   127   III: 11052815-11052941 Caenorhabditis elegans
Exon104805   277   III: 11056000-11056276 Caenorhabditis elegans
Exon104848   112   III: 11057284-11057395 Caenorhabditis elegans
Exon104857   528   III: 11057920-11058447 Caenorhabditis elegans
Exon104884   220   III: 11058866-11059085 Caenorhabditis elegans
Exon104911   267   III: 11060702-11060968 Caenorhabditis elegans
Exon104959   1216   III: 11061810-11063025 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y48A6B.13a.1 11048843 11063025 1

1 Sequence

Length
3029

1 Sequence Ontology Term

Identifier Name Description
transcript