WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y48A6B.13q Sequence Name  Y48A6B.13q
Length (nt)  2592   Chromosome Location  III: 11042174-11042259
Chromosome . Primary Identifier  III Chromosome Location . Start  11042174
Chromosome Location . End  11042259
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y48A6B.13q

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE54466 SPAT-2, isoform q 94.9 863 Caenorhabditis elegans
 

Other

8 RNAi

WormBase ID
WBRNAi00056858
WBRNAi00056860
WBRNAi00020723
WBRNAi00020724
WBRNAi00006337
WBRNAi00006357
WBRNAi00037216
WBRNAi00077110

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:Y48A6B.13q 11042174 11042259 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012973 spat-2 Y48A6B.13 Caenorhabditis elegans

13 Locations


Feature . Primary Identifier 		Start End Strand
CDS:Y48A6B.13q 11042174 11042259 1
CDS:Y48A6B.13q 11042952 11042990 1
CDS:Y48A6B.13q 11043050 11043175 1
CDS:Y48A6B.13q 11043864 11044008 1
CDS:Y48A6B.13q 11044064 11044133 1
CDS:Y48A6B.13q 11044935 11045491 1
CDS:Y48A6B.13q 11052815 11052941 1
CDS:Y48A6B.13q 11056000 11056276 1
CDS:Y48A6B.13q 11057278 11057395 1
CDS:Y48A6B.13q 11057920 11058447 1
CDS:Y48A6B.13q 11058866 11059085 1
CDS:Y48A6B.13q 11060702 11060968 1
CDS:Y48A6B.13q 11061810 11061841 1

1 Sequence

Length
2592

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y48A6B.13q.1 Y48A6B.13q.1 2592   III: 11042174-11061841