WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y48A6B.6a.1 Sequence Name  Y48A6B.6a.1
Length (nt)  1635   Chromosome Location  III: 11020440-11025292
Chromosome . Primary Identifier  III Chromosome Location . Start  11020440
Chromosome Location . End  11025292 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y48A6B.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012967 kvs-4 Y48A6B.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y48A6B.6a Y48A6B.6a 1512   III: 11020440-11020579

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y48A6B.6a.1 11020440 11025292 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon104564   140   III: 11020440-11020579 Caenorhabditis elegans
Exon104566   179   III: 11020702-11020880 Caenorhabditis elegans
Exon104569   132   III: 11021867-11021998 Caenorhabditis elegans
Exon104572   113   III: 11022041-11022153 Caenorhabditis elegans
Exon104575   241   III: 11022293-11022533 Caenorhabditis elegans
Exon104578   78   III: 11022585-11022662 Caenorhabditis elegans
Exon104581   251   III: 11023124-11023374 Caenorhabditis elegans
Exon104584   134   III: 11023459-11023592 Caenorhabditis elegans
Exon104587   26   III: 11023651-11023676 Caenorhabditis elegans
Exon104589   30   III: 11023757-11023786 Caenorhabditis elegans
Exon104592   71   III: 11024082-11024152 Caenorhabditis elegans
Exon104596   240   III: 11025053-11025292 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y48A6B.6a.1 11020440 11025292 1

1 Sequence

Length
1635

1 Sequence Ontology Term

Identifier Name Description
transcript