WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y48A6B.6c.1 Sequence Name  Y48A6B.6c.1
Length (nt)  1782   Chromosome Location  III: 11012564-11025293
Chromosome . Primary Identifier  III Chromosome Location . Start  11012564
Chromosome Location . End  11025293 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y48A6B.6c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012967 kvs-4 Y48A6B.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y48A6B.6c Y48A6B.6c 1485   III: 11012628-11012632

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y48A6B.6c.1 11012564 11025293 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon104556   69   III: 11012564-11012632 Caenorhabditis elegans
Exon104558   92   III: 11013594-11013685 Caenorhabditis elegans
Exon104560   96   III: 11014820-11014915 Caenorhabditis elegans
Exon104563   55   III: 11015051-11015105 Caenorhabditis elegans
Exon104568   179   III: 11020702-11020880 Caenorhabditis elegans
Exon104571   132   III: 11021867-11021998 Caenorhabditis elegans
Exon104574   113   III: 11022041-11022153 Caenorhabditis elegans
Exon104577   241   III: 11022293-11022533 Caenorhabditis elegans
Exon104580   78   III: 11022585-11022662 Caenorhabditis elegans
Exon104583   251   III: 11023124-11023374 Caenorhabditis elegans
Exon104586   134   III: 11023459-11023592 Caenorhabditis elegans
Exon104591   30   III: 11023757-11023786 Caenorhabditis elegans
Exon104594   71   III: 11024082-11024152 Caenorhabditis elegans
Exon104597   241   III: 11025053-11025293 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y48A6B.6c.1 11012564 11025293 1

1 Sequence

Length
1782

1 Sequence Ontology Term

Identifier Name Description
transcript