WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y48A6B.6b.1 Sequence Name  Y48A6B.6b.1
Length (nt)  1806   Chromosome Location  III: 11012564-11025291
Chromosome . Primary Identifier  III Chromosome Location . Start  11012564
Chromosome Location . End  11025291 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y48A6B.6b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012967 kvs-4 Y48A6B.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y48A6B.6b Y48A6B.6b 1620   III: 11012628-11012632

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y48A6B.6b.1 11012564 11025291 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon104555   69   III: 11012564-11012632 Caenorhabditis elegans
Exon104557   92   III: 11013594-11013685 Caenorhabditis elegans
Exon104559   96   III: 11014820-11014915 Caenorhabditis elegans
Exon104562   55   III: 11015051-11015105 Caenorhabditis elegans
Exon104567   179   III: 11020702-11020880 Caenorhabditis elegans
Exon104570   132   III: 11021867-11021998 Caenorhabditis elegans
Exon104573   113   III: 11022041-11022153 Caenorhabditis elegans
Exon104576   241   III: 11022293-11022533 Caenorhabditis elegans
Exon104579   78   III: 11022585-11022662 Caenorhabditis elegans
Exon104582   251   III: 11023124-11023374 Caenorhabditis elegans
Exon104585   134   III: 11023459-11023592 Caenorhabditis elegans
Exon104588   26   III: 11023651-11023676 Caenorhabditis elegans
Exon104590   30   III: 11023757-11023786 Caenorhabditis elegans
Exon104593   71   III: 11024082-11024152 Caenorhabditis elegans
Exon104595   239   III: 11025053-11025291 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y48A6B.6b.1 11012564 11025291 1

1 Sequence

Length
1806

1 Sequence Ontology Term

Identifier Name Description
transcript