WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y39A1C.2.1 Sequence Name  Y39A1C.2.1
Length (nt)  3309   Chromosome Location  III: 10858284-10866945
Chromosome . Primary Identifier  III Chromosome Location . Start  10858284
Chromosome Location . End  10866945 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39A1C.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003898 oxi-1 Y39A1C.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y39A1C.2 Y39A1C.2 3201   III: 10858313-10858458

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y39A1C.2.1 10858284 10866945 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon104320   175   III: 10858284-10858458 Caenorhabditis elegans
Exon104321   133   III: 10859112-10859244 Caenorhabditis elegans
Exon104322   342   III: 10859748-10860089 Caenorhabditis elegans
Exon104323   380   III: 10860634-10861013 Caenorhabditis elegans
Exon104324   260   III: 10861728-10861987 Caenorhabditis elegans
Exon104325   275   III: 10862123-10862397 Caenorhabditis elegans
Exon104326   92   III: 10862553-10862644 Caenorhabditis elegans
Exon104327   119   III: 10862772-10862890 Caenorhabditis elegans
Exon104328   121   III: 10863218-10863338 Caenorhabditis elegans
Exon104329   404   III: 10864103-10864506 Caenorhabditis elegans
Exon104330   349   III: 10865295-10865643 Caenorhabditis elegans
Exon104331   159   III: 10866236-10866394 Caenorhabditis elegans
Exon104332   500   III: 10866446-10866945 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y39A1C.2.1 10858284 10866945 1

1 Sequence

Length
3309

1 Sequence Ontology Term

Identifier Name Description
transcript