WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K11D9.2a.1 Sequence Name  K11D9.2a.1
Length (nt)  3633   Chromosome Location  III: 10812532-10816844
Chromosome . Primary Identifier  III Chromosome Location . Start  10812532
Chromosome Location . End  10816844 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K11D9.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004736 sca-1 K11D9.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K11D9.2a K11D9.2a 3180   III: 10812951-10813253

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:K11D9.2a.1 10812532 10816844 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon104248   722   III: 10812532-10813253 Caenorhabditis elegans
Exon104252   350   III: 10813304-10813653 Caenorhabditis elegans
Exon104256   2058   III: 10813709-10815766 Caenorhabditis elegans
Exon104263   139   III: 10815821-10815959 Caenorhabditis elegans
Exon104266   215   III: 10816384-10816598 Caenorhabditis elegans
Exon104269   82   III: 10816646-10816727 Caenorhabditis elegans
Exon104273   67   III: 10816778-10816844 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:K11D9.2a.1 10812532 10816844 -1

1 Sequence

Length
3633

1 Sequence Ontology Term

Identifier Name Description
transcript