WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y39A1B.2c.1 Sequence Name  Y39A1B.2c.1
Length (nt)  2157   Chromosome Location  III: 10781881-10789824
Chromosome . Primary Identifier  III Chromosome Location . Start  10781881
Chromosome Location . End  10789824 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39A1B.2c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004233 ptr-19 Y39A1B.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y39A1B.2c Y39A1B.2c 2157   III: 10781881-10782146

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y39A1B.2c.1 10781881 10789824 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon104165   266   III: 10781881-10782146 Caenorhabditis elegans
Exon104168   112   III: 10782367-10782478 Caenorhabditis elegans
Exon104172   122   III: 10782887-10783008 Caenorhabditis elegans
Exon104178   81   III: 10785639-10785719 Caenorhabditis elegans
Exon104181   113   III: 10785904-10786016 Caenorhabditis elegans
Exon104184   104   III: 10786061-10786164 Caenorhabditis elegans
Exon104187   86   III: 10786215-10786300 Caenorhabditis elegans
Exon104190   84   III: 10786656-10786739 Caenorhabditis elegans
Exon104193   119   III: 10786789-10786907 Caenorhabditis elegans
Exon104196   470   III: 10788022-10788491 Caenorhabditis elegans
Exon104198   467   III: 10788991-10789457 Caenorhabditis elegans
Exon104202   117   III: 10789643-10789759 Caenorhabditis elegans
Exon104203   16   III: 10789809-10789824 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y39A1B.2c.1 10781881 10789824 1

1 Sequence

Length
2157

1 Sequence Ontology Term

Identifier Name Description
transcript