WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y39A1B.2a.1 Sequence Name  Y39A1B.2a.1
Length (nt)  3040   Chromosome Location  III: 10781853-10791176
Chromosome . Primary Identifier  III Chromosome Location . Start  10781853
Chromosome Location . End  10791176 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39A1B.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004233 ptr-19 Y39A1B.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y39A1B.2a Y39A1B.2a 3012   III: 10781881-10782146

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y39A1B.2a.1 10781853 10791176 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon104163   294   III: 10781853-10782146 Caenorhabditis elegans
Exon104166   112   III: 10782367-10782478 Caenorhabditis elegans
Exon104170   122   III: 10782887-10783008 Caenorhabditis elegans
Exon104176   81   III: 10785639-10785719 Caenorhabditis elegans
Exon104179   113   III: 10785904-10786016 Caenorhabditis elegans
Exon104182   104   III: 10786061-10786164 Caenorhabditis elegans
Exon104185   86   III: 10786215-10786300 Caenorhabditis elegans
Exon104188   84   III: 10786656-10786739 Caenorhabditis elegans
Exon104191   119   III: 10786789-10786907 Caenorhabditis elegans
Exon104194   470   III: 10788022-10788491 Caenorhabditis elegans
Exon104199   531   III: 10788991-10789521 Caenorhabditis elegans
Exon104201   117   III: 10789643-10789759 Caenorhabditis elegans
Exon104204   153   III: 10789809-10789961 Caenorhabditis elegans
Exon104205   258   III: 10790202-10790459 Caenorhabditis elegans
Exon104206   396   III: 10790781-10791176 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y39A1B.2a.1 10781853 10791176 1

1 Sequence

Length
3040

1 Sequence Ontology Term

Identifier Name Description
transcript