WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y39A1B.3.1 Sequence Name  Y39A1B.3.1
Length (nt)  4665   Chromosome Location  III: 10763131-10777076
Chromosome . Primary Identifier  III Chromosome Location . Start  10763131
Chromosome Location . End  10777076 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39A1B.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001087 dpy-28 Y39A1B.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y39A1B.3 Y39A1B.3 4500   III: 10763147-10763274

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y39A1B.3.1 10763131 10777076 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon104146   144   III: 10763131-10763274 Caenorhabditis elegans
Exon104147   218   III: 10763943-10764160 Caenorhabditis elegans
Exon104148   275   III: 10765015-10765289 Caenorhabditis elegans
Exon104149   370   III: 10765942-10766311 Caenorhabditis elegans
Exon104150   524   III: 10767094-10767617 Caenorhabditis elegans
Exon104151   191   III: 10768442-10768632 Caenorhabditis elegans
Exon104152   90   III: 10768681-10768770 Caenorhabditis elegans
Exon104153   160   III: 10769051-10769210 Caenorhabditis elegans
Exon104154   850   III: 10769257-10770106 Caenorhabditis elegans
Exon104155   661   III: 10770876-10771536 Caenorhabditis elegans
Exon104156   156   III: 10772310-10772465 Caenorhabditis elegans
Exon104157   273   III: 10772785-10773057 Caenorhabditis elegans
Exon104158   87   III: 10774241-10774327 Caenorhabditis elegans
Exon104159   79   III: 10774375-10774453 Caenorhabditis elegans
Exon104160   207   III: 10775019-10775225 Caenorhabditis elegans
Exon104161   380   III: 10776697-10777076 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y39A1B.3.1 10763131 10777076 1

1 Sequence

Length
4665

1 Sequence Ontology Term

Identifier Name Description
transcript