WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y39A1A.16.1 Sequence Name  Y39A1A.16.1
Length (nt)  1533   Chromosome Location  III: 10679271-10682417
Chromosome . Primary Identifier  III Chromosome Location . Start  10679271
Chromosome Location . End  10682417 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39A1A.16.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012654 Y39A1A.16 Y39A1A.16 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y39A1A.16 Y39A1A.16 1125   III: 10679474-10679521

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y39A1A.16.1 10679271 10682417 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon103931   251   III: 10679271-10679521 Caenorhabditis elegans
Exon103932   77   III: 10679569-10679645 Caenorhabditis elegans
Exon103933   258   III: 10679716-10679973 Caenorhabditis elegans
Exon103934   325   III: 10680215-10680539 Caenorhabditis elegans
Exon103935   272   III: 10680853-10681124 Caenorhabditis elegans
Exon103936   350   III: 10682068-10682417 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y39A1A.16.1 10679271 10682417 1

1 Sequence

Length
1533

1 Sequence Ontology Term

Identifier Name Description
transcript