WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y39A1A.15c.1 Sequence Name  Y39A1A.15c.1
Length (nt)  3118   Chromosome Location  III: 10666922-10677522
Chromosome . Primary Identifier  III Chromosome Location . Start  10666922
Chromosome Location . End  10677522 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39A1A.15c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000566 cnt-2 Y39A1A.15 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y39A1A.15c Y39A1A.15c 2712   III: 10666960-10667058

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y39A1A.15c.1 10666922 10677522 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon103860   137   III: 10666922-10667058 Caenorhabditis elegans
Exon103866   88   III: 10667690-10667777 Caenorhabditis elegans
Exon103873   230   III: 10667830-10668059 Caenorhabditis elegans
Exon103881   136   III: 10669205-10669340 Caenorhabditis elegans
Exon103890   593   III: 10672848-10673440 Caenorhabditis elegans
Exon103898   125   III: 10673895-10674019 Caenorhabditis elegans
Exon103907   1123   III: 10674509-10675631 Caenorhabditis elegans
Exon103916   162   III: 10676454-10676615 Caenorhabditis elegans
Exon103927   524   III: 10676999-10677522 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y39A1A.15c.1 10666922 10677522 1

1 Sequence

Length
3118

1 Sequence Ontology Term

Identifier Name Description
transcript