WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y39A1A.15e.1 Sequence Name  Y39A1A.15e.1
Length (nt)  3204   Chromosome Location  III: 10656367-10677517
Chromosome . Primary Identifier  III Chromosome Location . Start  10656367
Chromosome Location . End  10677517 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39A1A.15e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000566 cnt-2 Y39A1A.15 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y39A1A.15e Y39A1A.15e 2622   III: 10664524-10664532

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y39A1A.15e.1 10656367 10677517 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon103847   87   III: 10656367-10656453 Caenorhabditis elegans
Exon103851   82   III: 10656892-10656973 Caenorhabditis elegans
Exon103858   59   III: 10664474-10664532 Caenorhabditis elegans
Exon103867   88   III: 10667690-10667777 Caenorhabditis elegans
Exon103874   230   III: 10667830-10668059 Caenorhabditis elegans
Exon103882   136   III: 10669205-10669340 Caenorhabditis elegans
Exon103891   593   III: 10672848-10673440 Caenorhabditis elegans
Exon103899   125   III: 10673895-10674019 Caenorhabditis elegans
Exon103908   1123   III: 10674509-10675631 Caenorhabditis elegans
Exon103917   162   III: 10676454-10676615 Caenorhabditis elegans
Exon103923   519   III: 10676999-10677517 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y39A1A.15e.1 10656367 10677517 1

1 Sequence

Length
3204

1 Sequence Ontology Term

Identifier Name Description
transcript