WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y39A1A.13a.1 Sequence Name  Y39A1A.13a.1
Length (nt)  1213   Chromosome Location  III: 10646170-10648861
Chromosome . Primary Identifier  III Chromosome Location . Start  10646170
Chromosome Location . End  10648861 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39A1A.13a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012651 orc-4 Y39A1A.13 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y39A1A.13a Y39A1A.13a 1164   III: 10646171-10646268

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y39A1A.13a.1 10646170 10648861 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon103817   99   III: 10646170-10646268 Caenorhabditis elegans
Exon103821   65   III: 10646350-10646414 Caenorhabditis elegans
Exon103824   473   III: 10646818-10647290 Caenorhabditis elegans
Exon103826   169   III: 10647618-10647786 Caenorhabditis elegans
Exon103830   114   III: 10648178-10648291 Caenorhabditis elegans
Exon103834   142   III: 10648517-10648658 Caenorhabditis elegans
Exon103841   151   III: 10648711-10648861 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y39A1A.13a.1 10646170 10648861 1

1 Sequence

Length
1213

1 Sequence Ontology Term

Identifier Name Description
transcript